Nexplorer Sourceforge Home
Nexplorer is a web-based phylogenetic browser, used to view and edit comparative data, and ideal for creating publication-quality views in which the tips of a tree are aligned with the rows of a character matrix (e.g., a sequence alignment).
Sourceforge link: https://sourceforge.net/projects/nexplorer/

Nexplorer2

Implementation: http://molevol.org/nexplorer
Programming language: Perl, JavaScript
Dependency libraries: PostScript::Simple, GD::Simple, DBI,CGI::Session,SPAN
Data Model: Bio::NEXUS
Setup Instructions: Makefile.PL

Nexplorer3New Icon

Implementation: http://exon.niaid.nih.gov/nexplorer3.html
Programming language: Java, JavaScript
Other Libraries : Jena, Google Web Toolkit (GWT), Jersey
Data Model: cdao-api
Setup Instructions: README.txt
Features: Uses Comparative Data Analysis Ontology (CDAO)

Nexplorer3 implementation